博士后:刘杨(深圳大学)、潘杰(深圳未知君科技有限公司)、刘宗保(广西师范大学)、汪永明(中科院先进技术研究院)、孙艺华(华大基因)、张翠景(深圳大学)、蔡铭伟(深圳湾实验室)、卢中一(深圳大学)、张志锋(南方海洋科学与工程实验室广州)、韦巧艳(桂林电子科技大学)、赵丽娜(新乡医学院)、崔国杰(西湖大学)、向荣(重庆医科大学附属第二医院)
2.Marine Life Science & Technology (MLST), "Cultivation of the uncultured microorganisms" Special Issue
4.Frontiers in Microbiology, Research Topic "The Uncultured Microorganisms: Novel Technologies and Applications".
Huan Du, Jie Pan, Dayu Zou, Yuhan Huang, Yang Liu*,Meng Li* (2022) Active functional modules derived from network analysis and metabolic interactions reveal the functions of microbiome.Microbiome(Accepted)
Xinxu Zhang, Yuhan Huang, Yang Liu, Wei Xu, Jie Pan, Xiaowei Zheng, Huan Du, Cuijing Zhang, Zhongyi Lu, Dayu Zou, Zongbao Liu, Mingwei Cai, Jinbo Xiong, Yaxin Zhu, Zhiyang Dong, Hongchen Jiang,JuquanJiang,Hailiang Dong, Zhuhua Luo, Li Huang,MengLi* (2022) An ancient respiratory system in the widespread sedimentary archaea Thermoprofundales. Molecular Biology and Evolution.DOI10.1093/molbev/msac213
Ma, Zhao; Li, Yuanbo; Lu, Zhongyi; Pan, Jie; Li, Meng*(2022) A novel biosensor-based method for the detection of p-nitrophenol in agricultural soil.Chemosphere313:137306
Dayu Zou, Hongliang Li, Ping Du, Hongbin Liu, Jianfang Chen,Meng Li* (2022) Distinct features of sedimentary archaeal communities in hypoxia and non-hypoxia regions of the Chengjiang River Estuary. Microbiology Spectrum(Accepted)
Yuhan Huang, Lirui Liu, Jiayi Li, Jie Pan,Meng Li* (2022) Limibaculum sediminis sp. nov., isolated from mangrove sediment.International Journal of Systematic and Evolutionary Microbiology(Accepted)
Zongbao Liu, Qiaoyan Wei, Dayu Zou, Siyu Zhang, Chuanlun Zhang, Zhexue Quan,Meng Li*(2022) Deterministic factors shaping the comammox community niche differentiation in the Pearl River estuary ecosystem.Microbiology Spectrumhttps://doi.org/10.1128/spectrum.01016-22.
夏润月,李猛*(2022) 海洋古菌—站在光外的英雄.知识就是力量,595:12-15
Guojie Cui, Zongbao Liu, Wei Xu, Yuanhao Gao, Shuai Yang, Hans-Peter Grossart,Meng Li*, Zhuhua Luo* (2022) Metagenomic exploration of antibiotic resistance genes and their hosts in aquaculture waters of the semi-closed Dongshan Bay (China).Science of the Total Environment838:155784.https://doi.org/10.1016/j.scitotenv.2022.155784.
Rong Xiang,Meng Li*(2022) Detection of a novel metallo-β-lactamase CAM-2 in a metagenome-assembled genome from China.Microbiology Spectrume0026122,https://doi.org/10.1128/spectrum.00261-22.
Yang Liu,Meng Li* (2022) Importance of Korarchaeota in the phylogeny of TACK and Asgard archaea.mLifehttps://doi.org/10.1002/mlf2.12020.
Yuan Yao#+, Jie Pan#, Yang Pu+, Karin Kan,Meng Li, Olivier Habimana* (2022) The response of a freshwater biofilm model to a sub-inhibitory concentration of erythromycin: a metatranscriptomic study.Journal of Environmental Chemical Engineeringhttps://doi.org/10.1016/j.jece.2022.107248.
Jie Pan#, Wei Xu#, Zhichao Zhou, Zhuhua Luo*,Meng Li*(2022) Metagenomic resolution of diverse microbial community and taxonomically redundant metabolisms in deep-sea hydrothermal sediments from Mid-Atlantic Ridge.Microbiome8:10https://doi.org/10.1186/s40168-021-01202-x.
Xinxu Zhang#,ZongbaoLiu#, Wei Xu, Jie Pan, Mingwei Cai, Zhuhua Luo,Meng Li*(2022)Genomic insights into versatile lifestyle of three new bacterial candidate phyla.SCIENCE CHINA Life Sciences64,https://doi.org/10.1007/s11427-021-2037-x.
Mingwei Cai#*, Xiuran Yin#, Xiaoyu Tang, Cuijing Zhang, Qingfei Zheng*,Meng Li*(2022) Metatranscriptomics reveals different features of methanogenic archaea among global vegetated coastal ecosystems.Science of the Total Environment802:149848.https://doi.org/10.1016/j.scitotenv.2021.149848.
Yuan Yao#+, Zongbao Liu#, Ka Kin Yip, Yang Pu, Wenda Cheng,Meng Li*, Olivier Habimana* (2021) Cross-Regional Scale Pollution of Freshwater Biofilms unveiled by Antibiotic Resistance Genes.Science of the Total Environment,818:151835https://doi.org/10.1016/j.scitotenv.2021.151835.
Zhuo Zhou#, Cui-jing Zhang#, Peng-fei Liu#, Lin Fu#, Rafael Laso-Pérez, Lu Yang, Li-Ping Bai, Jun-zhang Lin, Wei-dong Wang, Gunter Wegener*,Meng Li*, Lei Cheng* (2022)Non-syntrophic methanogenic hydrocarbon degradation by an archaeal species.Nature601:257-262.https://www.nature.com/articles/s41586-021-04235-2.
Mingwei Cai,Changhai Duan, Xinxu Zhang, Jie Pan, Yang Liu, Cuijing Zhang,Meng Li*(2021) Genomic and transcriptomic dissection of Theionarchaea in marine ecosystem.SCIENCE CHINA Life Sciences64, https://doi.org/10.1007/s11427-021-1996-x
Wen-Cong Huang#, Yang Liu#, Xinxu Zhang, Cui-Jing Zhang, Dayu Zou, Shiling Zheng, Wei Xu+, Zhu-Hua Luo, Fanghua Liu,Meng Li*(2021) Comparative genomic analysis reveals metabolic flexibility of Woesearchaeota.Nature Communications12:5281.https://doi.org/10.1038/s41467-021-25565-9.
Zhimeng Xu, Yingdong Li,Meng Li, Hongbin Liu* (2021) Transcriptomic response ofDaphnia magnato nitrogen or phosphorus limited diet.Ecology and Evolution11:11009-11019https://doi.org/10.1002/ece3.7889.
Zhi-Feng Zhang, Yue-Ping Pan, Yue Liu,Meng Li* (2021) High-level diversity of basal fungal lineages and the control of fungal community assembly by stochastic processes in mangrove sediments.Applied and Environmental Microbiology87: e00928-21.https://doi.org/10.1128/AEM.00928-21.
Lirui Liu, Wen-Cong Huang, Yang Liu,Meng Li* (2021)Diversity ofcellulolytic microorganisms and microbial cellulases.International Biodeterioration & Biodegradationhttps://doi.org/10.1016/j.ibiod.2021.105277
Zhi-Feng Zhang, Yue-Ping Pan, Jie Pan,Meng Li*(2021) Biogeography, assembly patterns, driving factors and interactions of archaeal community assembly in mangrove sedimentsmSystems6: e01381-20.https://doi.org/10.1128/mSystems.01381-20.
Yang Liu#, Kira S. Makarova#, Wen-Cong Huang#, Yuri I. Wolf, Anastasia Nikolskaya, Xinxu Zhang, Mingwei Cai, Cui-Jing Zhang, Wei Xu, Zhuhua Luo, Lei Cheng, Eugene V. Koonin*,Meng Li* (2021) Expanded diversity of Asgard archaea and their relationships with eukaryotes.Nature593: 553-557https://www.nature.com/articles/s41586-021-03494-3.
朱红惠,黄力,李文均,李猛(2021)未/难培养微生物:风正扬帆再起航,共辉煌.微生物学报61(4): i–ii.
Yang Pu#+, Jie Pan#, Yuan Yao+, Wing Yui Ngan, Yang Yang,Meng Li, Olivier Habimana* (2021)Ecotoxicological effects of erythromycin on a multispecies biofilm model, revealed by metagenomic and metabolomic approaches.Environmental Pollution, 276:116737.https://doi.org/10.1016/j.envpol.2021.116737
Zhongyi Lu, Zongbao Liu, Cuijing Zhang, Siyu Zhang,Meng Li* (2021) Spatial and Seasonal Variations of Sediment Bacterial Communities in a River-bay System in South China.Applied Microbiology and Biotechnology105: 1979-1989.https://doi.org/10.1007/s00253-021-11142-z
Rong Xiang,Meng Li* (2021) Identification of Tn6835 and a Novel Genomic Island MMGI-1 in a Pan-ResistantMorganella MorganiiStrain.Antimicrobial Agents and Chemotherapyhttps://doi.org/10.1128/AAC.02524-20
房凌旭,李龙,卢中一,李猛* (2021)口腔未培养微生物分离培养策略的研究进展.微生物学报61(4): 1-12.
Xiuran Yin#, Mingwei Cai#, Yang Liu, Guowei Zhou, Tim Richter-Heitmann1, David A. Aromokeye, Ajinkya Kulkarni, Rolf Nimzyk, Zhichao Zhou, Jie Pan, Yuchun Yang+, Ji-Dong Gu, Marcus Elvert,Meng Li*, Michael W. Friedrich* (2021)Subgroup level differences of physiological activities in marine Lokiarchaeota.The ISME Journal15(6): 848-861.https://doi.org/10.1038/s41396-020-00818-5.
Yuchun Yang+, Craig W. Herbold, Man-Young Jung, Wei Qin, Mingwei Cai, Huan Du, Jih-Gaw Lin, Xiao-yan Li,Meng Li*, Ji-Dong Gu* (2021) Survival strategies of ammonia-oxidizing archaea (AOA) in a full-scale WWTP treating mixed landfill leachate containing copper ions and operating at low-intensity of aeration.Water Research191: 116798.https://doi.org/10.1016/j.watres.2020.116798.
Wenzhe Hu#, Jie Pan#, Bin Wang, Jun Guo,Meng Li*, Meiying Xu*(2021) Metagenomic insights into the metabolism and evolution of a new Thermoplasmata order (Candidatus Gimiplasmatales).Environmental Microbiology23(7): 3695-3709https://doi.org/10.1111/1462-2920.15349
Yihong Yue+, Fushun Wang, Zhiwei Fu, Yi Tang, Jing Ma, Yong Qin,Meng Li, Ming Yang*, Xue-Ping Chen* (2020) Differential response of microbial diversity and abundance to hydrological residual time and age in cascade reservoirs.Journal of Soils and Sedimentshttps://doi.org/10.1007/s11368-020-02800-2.
Mingwei Cai, Xiuran Yin, Tim Richter-Heitmann, Wencong Huang, Yuchun Yang+, Cuijing Zhang, Changhai Duan, Jie Pan, Yang Liu, Yue Liu, Michael Friedrich,Meng Li*(2020)Ecological features and global distribution of Asgard archaea.Science of the Total Environmenthttps://doi.org/10.1016/j.scitotenv.2020.143581.
刘力睿,潘杰,李猛* (2020)微生物几丁质酶的研究进展、应用及展望生物资源42(5): 494–504.DOI:10.14188/j.ajsh.2020.05.003
Wen-Cong Huang, Yilun Hu, Gengxin Zhang*,Meng Li* (2020) Comparative genomic analysis reveals metabolic diversity of different Paenibacillus groups.Applied Microbiology and Biotechnology104: 10133-10143.https://doi.org/10.1007/s00253-020-10984-3.
Yuchun Yang+,Meng Li*, Zhong Hu, Jih-Gaw Lin, Xiao-Yan Li, Ji-Dong Gu* (2020) Deep insights into the green nitrogen removal by anammox in four full-scale WWTPs treating landfill leachate based on 16S rRNA gene and transcripts by 16S rRNA high-throughput sequencing.Journal of Cleaner Production276: 124176https://doi.org/10.1016/j.jclepro.2020.124176.
Cui-Jing Zhang, Yulian Chen, Yihua Sun, Jie Pan, Minwei Cai,Meng Li* (2020) Diversity, metabolisms and cultivation of archaea in mangrove ecosystems.Marine Life Science & Technology3:251-261.DOI: 10.1007/s42995-020-00081-9.
Zhichao Zhou, Yang Liu, Jie Pan, Karthik Anantharaman, John A Breier, Gregory J Dick,Meng Li*(2020) Gammaproteobacteria mediating methyl-, sulfur- and petroleum organic compound utilizations in deep ocean hydrothermal plume.The ISME Journal14: 3136-3148.https://doi.org/10.1038/s41396-020-00745-5.
Dayu Zou, Hongbin Liu,Meng Li*(2020) Community, Distribution, and Ecological Roles of Estuarine Archaea.Frontiers in Microbiology11:2060.doi: 10.3389/fmicb.2020.02060.
Yu Chen+, Jie Pan, Yuan Yun, Bo Zhi, Guoqiang Li,Meng Li*, Ting Ma* (2020) Halomonas plays a central role in the syntrophic community of an alkaline oil reservoir with alkali-surfactant-polymer (ASP) flooding.Science of the Total Environment747: 141333.https://doi.org/10.1016/j.scitotenv.2020.141333.
Dayu Zou, Ru Wan, Hongbin Liu, Shuh-Ji Kao*,Meng Li*(2020) Genomic characteristics of a novel ammonia-oxidizing archaea in the Jiulong River estuary.Applied and Environmental Microbiology86: e00736-20.https://doi .org/10.1128/AEM.00736-20.
Zongbao Liu, Cuijing Zhang, Qiaoyan Wei, Siyu Zhang, Zhexue Quan,Meng Li* (2020) Temperature and salinity drive comammox community composition in mangrove ecosystems across southeastern China.Science of the Total Environment742: 140456.https://doi.org/10.1016/j.scitotenv.2020.140456.
张新旭,李猛*(2020)海洋沉积物中几类常见古菌类群分布与潜在代谢特征.微生物学报60(9): 1–15.
Cui-Jing Zhang, Jie Pan, Yang Liu, Chang-Hai Duan,Meng Li* (2020)Genomic and transcriptomic insights into methanogenesis potential of novel methanogens from mangrove sediments.Microbiome8, 94.https://doi.org/10.1186/s40168-020-00876-z
Yuchun Yang+, Meng Li*, Hui Li, Xiao-Yan Li, Jih-Gaw Lin, Martin Denecke, Ji-Dong Gu* (2020) Specific and Effective Detection of Anammox Bacteria Using PCR Primers of 16S rRNA and Functional Genes.Science of the Total Environmenthttps://doi.org/10.1016/j.scitotenv.2020.139387
Zhongyi Lu#, Ting Fu#, Tianyi Li, Yang Liu, Siyu Zhang, Jinquan Li, Junbiao Dai, Eugene E Koonin, Guohui Li, Huiying Chu*,Meng Li*(2020) Co-evolution of Eukaryotic-like Vps4 and ESCRT-III Subunits in the Asgard Archaea mBio 11: e00417-20. https://doi.org/10.1128/mBio.00417-20.
Jie Pan, Zhichao Zhou, Oded Beja, Mingwei Cai, Yuchun Yang, Yang Liu, Ji-Dong Gu,Meng Li*(2020) Genetic and transcriptomic evidence of metabolisms for light sensing, porphyrin biosynthesis, Calvin-Benson-Bassham cycle, and urea production in Bathyarchaeota from mangrove sediments. Microbiome https://doi.org/10.1186/s40168-020-00820-1
Mingwei Cai#, Yang Liu#, Xiuran Yin, Zhichao Zhou, Michael W. Friedrich, Tim Richter-Heitmann, Rolf Nimzyk, Ajinkya Kulkarni, Xiaowen Wang, Wenjin Li, Jie Pan, Yuchun Yang, Ji-Dong Gu,Meng Li*(2020) Diverse Asgard archaea including the novel phylum Gerdarchaeota participate in organic matter degradation. SCIENCE CHINA Life Sciences 63 https://doi.org/10.1007/s11427-020-1679-1.
Yuchun Yang, Holger Daims, Yang Liu, Craig Herbold, Petra Pjevac, Jih-Gaw Lin,Meng Li*, Ji-Dong Gu* (2020) Activity and metabolic versatility of complete ammonia oxidizers in full-scale wastewater treatment systems. mBio 11:e03175-19. https://doi.org/10.1128/mBio.03175-19.
Zhichao Zhou, Yang Liu, Wei Xu, Jie Pan, Zhu-Hua Luo*,Meng Li*(2020) Genome- and community-level interaction insights into carbon utilization and element cycling functions of Hydrothermarchaeota in hydrothermal sediment. mSystems 5:e00795-19. https://doi.org/10.1128/mSystems.00795-19.
Yuchun Yang, Jie Pan, Zhichao Zhou, Jiapeng Wu, Yang Liu, Jih-Gaw Lin, Yiguo Hong, Xiaoyan Li,Meng Li*, Ji-Dong Gu* (2020) Complex microbial nitrogen-cycling networks in three distinct anammox-inoculated wastewater treatment systems. Water Research 168: 115142. https://doi.org/10.1016/j.watres.2019.115142.
Yongming Wang, Jie Pan, Jun Yang, Yueping Pan, Zhichao Zhou,Meng Li*(2020) Patterns and processes of free-living and particle-associated bacterioplankton and archaeaplankton communities in a subtropical river-bay system in South China. Limnology and Oceanography 65(S1): S161-S179.
Cui-Jing Zhang, Jie Pan, Chang-Hai Duan, Yong-Ming Wang, Yang Liu, Jian Sun, Hai-Chao Zhou, Xin Song,Meng Li*(2019) Prokaryotic diversity in mangrove sediments across southeastern China fundamentally differs from that in other biomes. mSystems 4:e00442-19. https://doi.org/10.1128/mSystems.00442-19.
Zongbao Liu, Uli Klümper, Yang Liu, Yuchun Yang, Jih-Gaw Lin, Ji-Dong Gu,Meng Li*(2019) Metagenomic and metatranscriptomic analyses reveal activity and hosts of antibiotic resistance genes in activated sludge. Environment International 129:208-220 doi.org/10.1016/j.envint.2019.05.036.
Dayu Zou, Yingdong Li, Hongbin Liu*,Meng Li*(2019) Genomic adaptation to eutrophication of ammonia-oxidizing Archaea in the Pearl River estuary. Environmental Microbiology DOI: 10.1111/1462-2920.14613
Zhi-Chao Zhou, Yang Liu, Karen G Lloyd, Jie Pan, Yuchun Yang, Ji-Dong Gu*,Meng Li*(2019) Genomic and transcriptomic insights into the ecology and metabolism of benthic archaeal cosmopolitan, Thermoprofundales (MBG-D archaea) The ISME Journal 13(4): 885-901. https://doi.org/10.1038/s41396-018-0321-8.
Xiaobo Liu,Meng Li*, Cindy J. Castelle, Alexander J. Probst, Zhichao Zhou, Jie Pan, Yang Liu, Jillian F. Banfield, Ji-Dong Gu* (2018) Insights into the ecology, evolution and metabolism of the widespread Woesearchaeotal lineages. Microbiome 6(1): 102. DOI: 10.1186/s40168-018-0488-2.
Zhi-Chao Zhou, Jie Pan, Fengping Wang, Ji-Dong Gu,Meng Li*(2018) Bathyarchaeota: globally distributed metabolic generalists in anoxic environments FEMS Microbiology Reviews 42(5): 639-655. DOI: 10.1093/femsre/fuy023.
Yang Liu, Zhi-Chao Zhou, Jie Pan, Brett Baker, Ji-Dong Gu,Meng Li*(2018) Comparative genomic inference suggests mixotrophic lifestyle for Thorarchaeota. The ISME Journal 12:1021-1031. DOI: org/10.1038/s41396-018-0060-x.
Research ID: http://www.researcherid.com/rid/K-3172-2012
Google Scholar: http://scholar.google.com/citations?user=tAjBf68AAAAJ&hl=en